RetrogeneDB ID:
retro_mputfur_840
Organism:
Location:
GL896955.1:1731006-1731200 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
56.06 %
Coverage:
61.9 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
TXN
Parental gene aliases:
No gene alias available
Parental gene description:
thioredoxin [Source:HGNC Symbol;Acc:12435]

Genomic region (view in browser)





>retro_mputfur_840
TTCTCTCATTGTCTCTCTGAGAAGTATTCTAACGTGGTGTTCCTTGAGGTCCACATCGAT
GACAGGGTATTGCTACAGAGTGTGAAGTCAAATTCATGGCAGCCTTACAGTTTTTTTTTA
AAAAGGAGAAAAAAATAGATGAGTTTTCTGGATCAAATAAGGAAAAACTTGAAGCCACCA
TGAATGAGTTAATC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
FFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQK-VGEFSGANKEKLEATINELI
F.H.LSEKYSNVVFLEV..DD.....S.......P.....K...K...EFSG.NKEKLEAT.NELI
Retrocopy
FSHCLSEKYSNVVFLEVHIDDRVLLQSVKSNSWQPYXXXXKRRKK/IDEFSGSNKEKLEATMNELI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide