RetrogeneDB ID:
retro_mputfur_841
Organism:
Location:
GL896955.1:3686658-3686880 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
67.57 %
Coverage:
63.79 %
Frameshifts:
0
Stop codons:
2


Parental gene:
Parental gene symbol:
DNAJC19
Parental gene aliases:
No gene alias available
Parental gene description:
DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:HGNC Symbol;Acc:30528]

Genomic region (view in browser)





>retro_mputfur_841
GCCAGTACGGTGTTACCATCCAGAATGACCATTGTTTCTCCAGGATTTGCAGGGTGTTAC
ATTTTGCAAGCCATGAAACACATGGAGCCTCAAGTAAAACAAGTTTTTCAAAGCCCACCA
AAATCTGTCCTCAGTGGTGGTTATTATAGAGATGGATTTGAACCCTAAAAGACTAAATGA
GAAATAGTATTAATGCTAGCCACAAGCCTTGCTGCCAATAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ASTVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKREAALILGISPTANK
ASTV.....TI...GFAG.Y.LQAMKHMEPQVKQVFQS.PKS..SGGYYR.GFEP..TK.E..L.L..S..ANK
Retrocopy
ASTVLPSRMTIVSPGFAGCYILQAMKHMEPQVKQVFQSPPKSVLSGGYYRDGFEP*KTK*EIVLMLATSLAANK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide