RetrogeneDB ID:
retro_mputfur_843
Organism:
Location:
GL896955.1:4900544-4900860 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
50.89 %
Coverage:
55.96 %
Frameshifts:
4
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_843
ATTCCAGTGAAGCTGACCCTTCAGAATGGAAAGACCCAGAATGAGGTAGCACCTTCCTCC
ACTGCTCCATCATCAAAACCCTGGAGGAACCACCCAGAGATAGAAAAGGAAAGTTACACA
TTAAATACAATAGAACAATCACTCTTTATGTTATTGTCAGAAGCACCTGACAGTTGCAAC
ATTGATCTTTAGGCAGACAATTCCTCAGCGTTAATTAAAGCAATCCTGGGGACTGCCCAG
TTTGTGGGCCTCGGTGTCCATGGCTCCGCCCTTGTCACATCAAAGATGACATCAACAGTG
ATATGGTGGATGCCCA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ITVKLTIQNRQAQIEVVPSASA-LIIKALKEPPRDRKKQKNSAVKHSGNITFDEIVNIARQMRHRSLAREL-SGTIKEILGTAQSVGCNVDGR-HPHDII
I.VKLT.QN...Q.EV.PS..A..IIK.L.EPPRDRK.......K....IT...IV....Q..H.SL.R...S..IK.ILGTAQ.VG..V.G...P..I.
Retrocopy
IPVKLTLQNGKTQNEVAPSSTA/SIIKTLEEPPRDRKGKLH--IKYNRTITLYVIVRST*QLQH*SLGRQF\SALIKAILGTAQFVGLGVHGS/RPCHIK


Parental protein
DDINSGAVE-CP
DDINS..V..CP
Retrocopy
DDINSDMVD/CP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide