RetrogeneDB ID:
retro_mputfur_848
Organism:
Location:
GL896957.1:2175499-2175775 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
69.57 %
Coverage:
79.31 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
DNAJC19
Parental gene aliases:
No gene alias available
Parental gene description:
DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:HGNC Symbol;Acc:30528]

Genomic region (view in browser)





>retro_mputfur_848
AAGACCAGTATAGTGGTCGCAGTTGGACCGACCTTCGCTGCTGCAGGATTTGCAAGCTAT
CATGTTTTGCAGGCCATGAAGCATAGGGAGCCTCAAGTAAAACAGGTTTTTCACAATCTA
CCAAAACCTGCTTTCTGTGGTGGCTCTGACAGAGGTGGGGAGGAATCCAAAATGGCAAAA
TGAGAAGTAGCATTAATACTAGGCATAAGGCCTACTGCTAGTAGAGGAAACAGAAGAGAT
GCTCATCTAGGAGTTATGCTTTTAAATCACCCAGAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QASTVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKREAALILGISPTANKGKIRDAHRRIMLLNHPD
..S.VVAVG.T.AAAGFA...VLQAMKH.EPQVKQVF..LPK.AF.GG..RGG.E.KM.K.E.ALILGI.PTA..G..RDAH...MLLNHPD
Retrocopy
KTSIVVAVGPTFAAAGFASYHVLQAMKHREPQVKQVFHNLPKPAFCGGSDRGGEESKMAK*EVALILGIRPTASRGNRRDAHLGVMLLNHPD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide