RetrogeneDB ID:
retro_mputfur_85
Organism:
Location:
GL897124.1:1081992-1082400 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.52 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL32
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L32 [Source:HGNC Symbol;Acc:10336]

Genomic region (view in browser)





>retro_mputfur_85
ATGGCTGCCCTCAGACCTTTGGTGAAGCCCAAGATCATTAAAAAGAGGACCAAGAAGTTC
ATCCGGCACCAGTCAGACCGATATGTCAAAATTAAGCGCAACTGGCGGAAGCCGAGAGGC
ATTGACAATAGGGTGCGCAGAAGATTCAAGGGCCAGATCTTGATGCCCAACATTGGTTAT
GGGAGCAACAAGAAGACAAAGCACATGTTGCCCAGTGGCTTCAGGAAGTTCCTAGTGCAC
AACGTCAAGGAGCTTGAAGTGCTGCTGATGTGTAACAAATCTTACTGTGCAGAGATTGCT
CACAACGTCTCCTCCAAGAACCGCAAAGCTATTGTGGAAAGAGCAGTCCAGCTGGCAATC
AGAGTCACCAATCCCAATGCCAGGCTGCGCAGTGAAGAAAATGAATAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIA
MAALRPLVKPKI.KKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIA
Retrocopy
MAALRPLVKPKIIKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIA


Parental protein
HNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE
HNVSSKNRKAIVERA.QLAIRVTNPNARLRSEENE
Retrocopy
HNVSSKNRKAIVERAVQLAIRVTNPNARLRSEENE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide