RetrogeneDB ID:
retro_mputfur_850
Organism:
Location:
GL896957.1:6029441-6029970 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
71.11 %
Coverage:
100.0 %
Frameshifts:
2
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_850
ATGGTGGACAGGAAGGAGGGAGAGGAGAAGCCCGAGAAACCACAGCGAGCTGGAGCCGCT
GGAGAACCTGAAGAAGAAGTAGAAAAAACTGTCAAAATTAAGACTATTTCTTTCAGTCAT
GGAGGGGAAAGTTCCAGTCACAGCGCTGAGATGCAATCAGCTGAAGAAGCAGCTGTGGGC
CTCCCAACAAAACCTACAAAGATCTCCAAGTTGGGATTTGCCATAGGTAGACGACAAAGC
AAACCTCAGCCATATCCATCAAACTTGGATCAAGGAAGCCTAAAAAACTGTTCCAACGCT
TGCTCCAAAAAACGTTTCAGTTGCAGCAGCTTTTAATGAAGATGAAGCTAGTGAGCCAGA
GGAAATGTCTCCAGAAGCAAAGATAAGGATGACAAATATTGGAAGGGATACACCCACGTC
AGCAGCACCAAACTCCTTCAGTAAAGGAAAGCAGGATTTTCCTGATAACCGGAAGCTCTG
AGGGCAAAATATAAAATCTCGCCTTGAAAATGTCCATGACCAAGACAAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MADGKAGEEKPEKPQRAGAAGGPEEEAEKPVKTKTVSSSNGGESSSRSAEKRSAEEEAADL-PTKPTKISKFGFAIGSQTTKKASAISIKLGSSKPKE-T
M.D.K.GEEKPEKPQRAGAAG.PEEE.EK.VK.KT.S.S.GGESSS.SAE..SAEE.A..L.P.K..K....G......TTK..SAISIKLGS.KPK..T
Retrocopy
MVDRKEGEEKPEKPQRAGAAGEPEEEVEKTVKIKTISFSHGGESSSHSAEMQSAEEAAVGL/PNKTYKDLQVGIC-HR*TTKQTSAISIKLGSRKPKK/T


Parental protein
VPTLAPKTLSVAAAFNEDEDSEPEEMPPEAKMRMKNIGRDTPTSAGPNSFNKGKHGFSDNQKLWERNIKSHLGNVHDQDN
VPTLAPK..SVAAAFNEDE.SEPEEM.PEAK.RM.NIGRDTPTSA.PNSF.KGK..F.DN.KL...NIKS.L.NVHDQDN
Retrocopy
VPTLAPKNVSVAAAFNEDEASEPEEMSPEAKIRMTNIGRDTPTSAAPNSFSKGKQDFPDNRKL*GQNIKSRLENVHDQDN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide