RetrogeneDB ID:
retro_mputfur_855
Organism:
Location:
GL896958.1:6633092-6633396 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
52.88 %
Coverage:
74.45 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL28
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L28 [Source:HGNC Symbol;Acc:10330]

Genomic region (view in browser)





>retro_mputfur_855
AACAGACTGTCCTACAACAGGCACAGTCACAACAAGACTGTGGACATGGCACCAGTGGCC
CATGGCAGAGCTGTAGCAGTGGTCATGAATGGAGATGGGGCCCACAAAAACCCATTGCCT
CCTACATAGGCACCAATATCATAATGAACGCATCAGCTATCCTCACCAGCATCAGGCACA
TACTCTTCAAGAACAAGTACTGCCCAAATCTGTGCATGGCTGTCATTCACATAGCCACCA
CCATCCTGTGCAGCCAGAAACCTGTGATGGTGAAGAAGCAGCAGCCCGTCCCACCAAGAG
CACC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
NSFRYNGLIHRKTVGVEPAADGKGVVVVMKR-RSGQRKPATSYVRTTINKNARATLSSVRHMIRKNKYRPDLRMAAIRRASAILRSQKPVMVKRKR-ARP
N...YN...H.KTV...P.A.G..V.VVM...R.G..KP..SY..T.I..NA.A.L.S.RH...KNKY.P.L.MA.I..A..IL.SQKPVMVK....ARP
Retrocopy
NRLSYNRHSHNKTVDMAPVAHGRAVAVVMNG/RWGPQKPIASYIGTNIIMNASAILTSIRHILFKNKYCPNLCMAVIHIATTILCSQKPVMVKKQQ/ARP


Parental protein
TKSS
TKS.
Retrocopy
TKST


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide