RetrogeneDB ID:
retro_mputfur_86
Organism:
Location:
GL896900.1:4801200-4801728 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
69.54 %
Coverage:
96.13 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
ARF3
Parental gene aliases:
No gene alias available
Parental gene description:
ADP-ribosylation factor 3 [Source:HGNC Symbol;Acc:654]

Genomic region (view in browser)





>retro_mputfur_86
ATGGGGAAGGTGCTATCCAAGATCTTCGGGAACAAGGAAATGCGGATCCTCATGTTGGGC
CTGGACGCGGCCGGCAAGACAACAATCCTGTACAAGTTGAAGCTGGGCCAGTCGGTGACC
ACCATTCCCACAGTGGGTTTCAACGTGGAGACGGTGACTTACAAAAACGTCAAGTTCAAC
GTGTGGGATGTGGGCGGCCAGGACAAGATCCGCCCGCTCTGGCGGCATTACTACACCGGG
ACCCAGGGTCTGATCTTCGTAGTGGACTGCGCCGACCGCGACCGCATCGACGAGGCCCGC
CAGGAGCTGCACCGCATTATCAATGACCGGGAGATGAGGGACGCCATAATCCTCATCTTC
GCCAACAAACAGGACCTGCCTGATGCCATGAAACCCCACGAGATCCAGGAGAAACTGGGC
CTGACCCGGATTCGGGACAGGAACTGGTATGTGCAGCCCTCCTGTGCCACCTCAGGGGAT
GGACTCTATGAGGGGCTCACATGGTTAACCTCTAACTACAAATCCTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEARE
G..L....G.KEMRILM.GLDAAGKTTILYKLKLG..VTTIPT.GFNVETV.YKN..F.VWDVGGQDKIRPLWRHY...TQGLIFVVD..DR.R..EAR.
Retrocopy
GKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQ


Parental protein
ELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKN
EL.R.....E.RDA..L.FANKQDLP.AM...EI..KLGL...R.RNWY.Q..CATSGDGLYEGL.WL....K.
Retrocopy
ELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide