RetrogeneDB ID:
retro_mputfur_863
Organism:
Location:
GL896961.1:5878447-5878659 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
61.11 %
Coverage:
78.89 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
SPINK2
Parental gene aliases:
No gene alias available
Parental gene description:
serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) [Source:HGNC Symbol;Acc:11245]

Genomic region (view in browser)





>retro_mputfur_863
GGAGGGAGCATGGCAGTCTTGGTGCTGCATGTGGCACTGTTGTTCCCAGACAGGGACTTG
GCAGTCTCTTTGGACTCTGAACTCTTGAGTGTGGACAGCCTTCAGAATGCAGAACATCAA
ACTGTGATCAGTATAAATAACCAGGATGCCCTAGAGACTTGAGCGCTGGGTGTGGAAAGG
ACATGTCTGCTTATCCCAACCAGTGTACTCTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GGSMALSAVRLVLLLLAADLAASLDSLSSEFD-QPSEYRTPNCNQYKLPGCPRDFSPVCGSDMSTYPNECTL
GGSMA.......LL....DLA.SLDS.....D.QPSE.RT.NC.QYK.PGCPRD.S..CG.DMS.YPN.CTL
Retrocopy
GGSMAVLVLHVALLFPDRDLAVSLDSELLSVD/QPSECRTSNCDQYK*PGCPRDLSAGCGKDMSAYPNQCTL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide