RetrogeneDB ID:
retro_mputfur_87
Organism:
Location:
GL897439.1:130062-131004 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.43 %
Coverage:
80.95 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RRAGB
Parental gene aliases:
No gene alias available
Parental gene description:
Ras-related GTP binding B [Source:HGNC Symbol;Acc:19901]

Genomic region (view in browser)





>retro_mputfur_87
ATGCCAAATACAGCCATGAAGAAGAAGGTGCTGTTGATGGGGAAGAGCGGGTCGGGCAAG
ACCAGCATGCGGTCGATTATTTTTGCAAATTATATCGCCCGCGACACCCGGCGCCTGGGT
GCCACCATTGATGTGGAGCACTCCCACGTCCGATTCCTGGGCAACCTAGTGCTCAACCTG
TGGGACTGTGGCGGTCAGGACACCTTCATGGAGAATTACTTCACCAGCCAGCGAGACAAC
ATCTTCCGTAACGTCGAGGTTTTGATTTACGTGTTTGACGTGGAGAGCCGCGAACTGGAA
AAGGACATGCATTACTACCAGTCGTGTCTGGAGGCCATCCTCCAGAACTCTCCGGATGCC
AAAATCTTCTGCCTGGTGCACAAAATGGATCTGGTTCAGGAGGATCAGCGTGACCTGATT
TTTAAAGAGCGAGAGGAAGACCTGAGGCGTTTGTCTCGCCCTCTGGAATGCGCTTGTTTT
CGAACCTCCATCTGGGACGAAACGCTCTACAAAGCCTGGTCCAGTATTGTCTATCAGCTG
ATTCCCAATGTGCAGCAGCTGGAGATGAACCTAAGGAATTTTGCCCAAATTATCGAGGCC
GACGAAGTCCTGCTGTTCGAGAGAGCCACGTTCTTGGTCATTTCCCATTACCAGTGCAAA
GAGCAGCGCGACGTCCACCGGTTCGAGAAGATCAGCAACATCATTAAACAGTTCAAGCTG
AGCTGCAGTAAATTAGCCGCCTCTTTCCAGAGCATGGAGGTTCGGAATTCTAACTTCGCT
GCTTTCATCGACATCTTCACGTCAAACACGTACGTGATGGTGGTTATGTCGGATCCGTCG
ATCCCTTCTGCAGCTACTCTGATCAACATTCGCAATGCCAGGAAACACTTTGAGAAGCTG
GAGAGAGTGGATGGTCCCAAGCACAGCCTTCTGATGCGTTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
TFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKVFCLVHKMDLVQEDQRDLIF
T.DVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAK.FCLVHKMDLVQEDQRDLIF
Retrocopy
TIDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQEDQRDLIF


Parental protein
KEREEDLRRLSRPLECSCFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFKLS
KEREEDLRRLSRPLEC.CFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFA.IIEADEVLLFERATFLVISHYQCKEQRD.HRFEKISNIIKQFKLS
Retrocopy
KEREEDLRRLSRPLECACFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAQIIEADEVLLFERATFLVISHYQCKEQRDVHRFEKISNIIKQFKLS


Parental protein
CSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEKLERVDGPKQCLLMR
CSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEKLERVDGPK..LLMR
Retrocopy
CSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEKLERVDGPKHSLLMR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide