RetrogeneDB ID:
retro_mputfur_871
Organism:
Location:
GL896962.1:9805093-9805326 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
50.62 %
Coverage:
62.02 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
COX5B
Parental gene aliases:
No gene alias available
Parental gene description:
cytochrome c oxidase subunit Vb [Source:HGNC Symbol;Acc:2269]

Genomic region (view in browser)





>retro_mputfur_871
TCAGAATTTCTTTGCTGAGCTGGAATGCTGGGTGATCAGGCCTCAGGGACCACAGTCCCA
GTTGGCTTGCTGCAGTATGCTTGAGGGCTTCTGGAGTTGGTTTTCCTGCTGGTGACCAGC
AGGCCACTGGGCTGGAGATCATGATGGTGGCATGGAATGAATTGAACCCTTTCAGTACAC
TAGCCCTGAAGGAAGCCTCAGACACCAAGGGAGACCCTAATTTAGTCCCAAGC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SRLLRGAGALAAQA-FRARGPNGVAAVRTMASRGGIPTDDDQATGLEREVMMAARKGLDPYNLLAPKAAAGTKEDPNLVPS
S..L..AG.L..QA..R...P...AAV...AS..G.P..D.QATGLE...MM.A...L.P...LA.K.A..TK.DPNLVPS
Retrocopy
SEFLC*AGMLGDQA/LRDHSPSWLAAVCLRASGVGFPAGDQQATGLE--IMMVAWNELNPFSTLALKEASDTKGDPNLVPS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide