RetrogeneDB ID:
retro_mputfur_873
Organism:
Location:
GL896963.1:4221243-4221618 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
67.18 %
Coverage:
99.22 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_873
ATGGCACCCGTGAAAGAGTTTGTGGCGAAGGGGGGCAAATAAAGAAAGCAAGTTCTGAAG
TTTACCCTTGATTGCACCCACCCTGTAGAAGATGGTGTCAATTTTGAACAGTTTTCTTCA
AGAGAGTATCAAAGTGAATGGAAAAGCTGGAAATCTCTGTGGAGGGGTGGTAACAACTGA
AAGGAGCAAAAGCAAGATTACTCCGTAACTTCTGAGGTGCCTTTTTCCAAAAGGTATTTG
AAATATCTCACCAAAACACACCTGAAGAAGAACAATCTCCGTGACTGGCTGCACACAGTC
GCTAACAGCAAAGAGAGTTATGAATTACATTACTTCCGGATTAACCAAGATGAGGAAGAG
AAGGAAGATGAGGAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPVKKLVAKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQF-LQERIKVNGKAGNL-GGGVVTI-ERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLR
MAPVK..VAKGGK..KQVLKFTLDCTHPVEDG.....NFEQF.LQE.IKVNGKAGNL.GG.V.T.....K....VTSE...............LKKNNLR
Retrocopy
MAPVKEFVAKGGK*RKQVLKFTLDCTHPVEDGV----NFEQF\LQESIKVNGKAGNLCGGVVTTE/KEQKQDYSVTSEXXXXXXXXXXXXXXXLKKNNLR


Parental protein
DWLRVVANSKESYELRYFQINQDEEEEEDED
DWL..VANSKESYEL.YF.INQDEEE.EDED
Retrocopy
DWLHTVANSKESYELHYFRINQDEEEKEDED


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide