RetrogeneDB ID:
retro_mputfur_876
Organism:
Location:
GL896963.1:5806968-5807520 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.91 %
Coverage:
69.96 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_876
GCTCGTGGTCCCAAGAAACATCTGAAGCGTGTAGCAGCTCCAAAGCATTGGATGCTGGAT
AAACTGACGGGTGTGTTCGCTCCTCGCCCATCTACTGGTCCCCATAAGCTGAGAGAGTGT
CTCCCTCTTATCATTTTCTTAAGGAACAGACTTAAGTATGCCCTAACAGGAGATGAAGTA
AAGAAGATCTGTATGCAGCGTTTTATTAAGATTGATGGCAAGGTCCGAACTGATATAACA
TACCCTGCTGGTTTTATGGATGTCATCAGCATTGACAAGACCGGAGAGAATTTCCGTCTG
ATCTATGATACCAAGGGTCGCTTTGCTGTTCATCGGATTACACTCGATGAGGCCAAGTAC
AAGTTGTGCAAAGTGAGAAAGATTTTTGTGGGGACAAAAGGCATCCCCCATCTGGTGACT
CACGATGCTCGCACCATCCGCTATCCTGATCCCCTCATCAAGGTCAATGACACCATTCAG
ATTGATTTGGAAACTGGAAAGATTACTGATTTCATCAAGTTTGACACTGGTAATCTGTGT
ATGGTGTGGGGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRL
ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRL
Retrocopy
ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRL


Parental protein
IYDTKGRFAVHRITLEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG
IYDTKGRFAVHRITL.EAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMV.G
Retrocopy
IYDTKGRFAVHRITLDEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVWG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide