RetrogeneDB ID:
retro_mputfur_884
Organism:
Location:
GL896964.1:3953982-3954377 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
78.1 %
Coverage:
70.47 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_884
GAGATTGGCCCACTGAGTTGGTCTTTGAAAAAGGCTGGTGATGACATCACCAAAGCGACC
TACAGCTGGATGGGTTTAAGGATTACAGTGAAACTGATCATTCAGAATAGACAGGCCCAG
ATTGAAGTGGTACCTTCTGCCCTGATTATCGAAGCCCTCAAGGAACCACCAAGAGACAGA
AAGAAGCAGAAAAACATGAAGCACAGTGGAAATATGACTTTTGATCAGATTGTCAATATT
GCCCAACAGATGCGGCAGTGATCTGTAGCCAGAGAACTCTCTGGAACCGTTAAAGAAATC
CTGGGGACTGCCCATGTGAGGGCTGCAATGTGGATGACTGCCACCCTCATGACATCATAG
ATGACATCAATAGTCATGCAGTGGAATGCCCAGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNSAVKHSGNITFDEIVNIARQMRHRSLARELSGT
.IGPL..S.KK.GDDI.KAT..W.GLRITVKL.IQNRQAQIEVVPSA..LII.ALKEPPRDRKKQKN...KHSGN.TFD.IVNIA.QMR..S.ARELSGT
Retrocopy
EIGPLSWSLKKAGDDITKATYSWMGLRITVKLIIQNRQAQIEVVPSA--LIIEALKEPPRDRKKQKN--MKHSGNMTFDQIVNIAQQMRQ*SVARELSGT


Parental protein
IKEILGTAQ-SVGCNVDGRHPHDIIDDINSGAVECPA
.KEILGTA....GCNVD..HPHDIIDDINS.AVECPA
Retrocopy
VKEILGTAH/CEGCNVDDCHPHDIIDDINSHAVECPA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide