RetrogeneDB ID:
retro_mputfur_890
Organism:
Location:
GL896966.1:4283331-4283702 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
64.8 %
Coverage:
54.63 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
AK3
Parental gene aliases:
No gene alias available
Parental gene description:
adenylate kinase 3 [Source:HGNC Symbol;Acc:17376]

Genomic region (view in browser)





>retro_mputfur_890
AGGGTTTATCACATACACCTGGCGATAAACATGGACGTGCCCGTCGAGGTCATCAGGCAA
CGCCTCTCGGCTTGCTGGATCCATCCGAGCAGTGGGCGCGTCTACAACCTCGAATTTCAC
CCGCCCCAACTGCTCAGCGTGGATGATCTGACTGGCGAGCCCCTGGTTCAGCGTGAGGTT
GACAGACCCGAGACACTCACCAAGAGGCTGAAGGCTTACGAAGACCAAACCAAACGCGTC
CTGGACTATTACCGGGGAAAGGGGGTGCTGGAAACCATCTCCAGATGGGAAACCAACAAG
ATCTGGGCCTGCGTGCGTGCCTTCCTGCAGACAAAGGTTGCAGAAATGGACCCCAAGCTT
CGGTGGCTCCG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RAYQIDTVINLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKAVGIDDLTGEPLIQRDDDKPETVVKRLKAYEVQTQPVLEYYQKKGVLETFSGTETDK
R.Y.I...IN..VP.EVI.QRL.A.WIHP.SGRVYN.EF.PP.....DDLTGEPL.QR..D.PET..KRLKAYE.QT..VL.YY..KGVLET.S..ET.K
Retrocopy
RVYHIHLAINMDVPVEVIRQRLSACWIHPSSGRVYNLEFHPPQLLSVDDLTGEPLVQREVDRPETLTKRLKAYEDQTKRVLDYYRGKGVLETISRWETNK


Parental protein
IWPYVYAFLQTKVPQMNQK-ASVTP
IW..V.AFLQTKV..M..K.ASV.P
Retrocopy
IWACVRAFLQTKVAEMDPK/ASVAP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide