RetrogeneDB ID:
retro_mputfur_892
Organism:
Location:
GL896966.1:7182392-7182623 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
76.62 %
Coverage:
82.8 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
HIGD1A
Parental gene aliases:
No gene alias available
Parental gene description:
HIG1 hypoxia inducible domain family, member 1A [Source:HGNC Symbol;Acc:29527]

Genomic region (view in browser)





>retro_mputfur_892
GGATCTAAACTTATCCAAAAAGCTAGAGAGGCCCCATCTGTTCCCAATGGAATGGCAAAG
TATGCAACAATAGTTGCATCTGGATTACTTAAATTAAAGAACAGGGGAAATCCTAAAATG
TCTGTTTACCTGATCCACCACGTGCGTGTGGCAGAAGGCTTTGTTGTGGGAGCAATGACT
CTTGGTATGGGCTATTCCATGGATAAGGAATTCTGGGCAAAGCCTAAACCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GSKLIRKAKEAPFVPIGMAGFAAIVAYGLYKLKSRGNTKMSVHLIHMRVAAQGFVVGAMTLGMGYSMYKEFWAKPKP
GSKLI.KA.EAP.VP.GMA..A.IVA.GL.KLK.RGN.KMSV.LIH....A.GFVVGAMTLGMGYSM.KEFWAKPKP
Retrocopy
GSKLIQKAREAPSVPNGMAKYATIVASGLLKLKNRGNPKMSVYLIHHVRVAEGFVVGAMTLGMGYSMDKEFWAKPKP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide