RetrogeneDB ID:
retro_mputfur_895
Organism:
Location:
GL896966.1:4806838-4808120 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
94.16 %
Coverage:
83.73 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_895
ATGTCCATCAGGGTGACCCAGAAGTCCTACAAGGTGTCCACCTCCGGCCCCCAGGCCTTC
AGCACCCGCTCCTACACCAGCAGGCCTGGCTCCCACATCAGCTCGTCTGCCTTCTCCTGG
GTGGGTGGCAGCTTCCAGGGGGGCCTGAACAGCAGCATGAGGGTGGTCGGGGGCTACGGC
GGCGGGGCCAGGGGTATGGGGGGCATCACGGCCGTCTCAGTGAACCAGAGCCTGCTGGGC
CCCCTTAAGCTGGAAGTGGATCCCAACATCCAAGCTGTGCGCACCCAGGAGAAGGAGCAG
ATCAAGACCCTCAACAACAAATTAGCCTCCTTCATCGACAAGGTGAGGCACCTGGAGCAG
CAGAACAAAGTTCTGGAGACCAAGTGGAGCCTCCTACAGCAGCAGAAGACTGTGCGGAGC
AACATAGACAACATGTTCGAGAGCTACATCAGCATCCTCCGGTGGCAGTTGGACACCCTG
GGCCAGGAGAAGCTGAAGCTGGAGGTGGAGCTTGGCAACATGCAGGGGCTGGTGGAGGAC
TTCAAGAATAAATATGAGGAGGAGATCAAAGAGCGTGCAGACATGGAGAATGAATTTGTC
CTCATCAAGAAGGATGTGGGCGAAGCTTACATGAACAAGGTAGAACTCGAGTCCCGCCTG
GAAGGGCTGACCGATGAGATCAAACTTCTTAAGGCAGCTGTATGAAGAGGAGATCCGTGA
GCTGCAGTCCCAGATCTTGGACACGTCTGTGGTCCTATCCATGGACAACAGCCGCTCCCT
GGACCTGGATGGCATCATCTCCGAGGTCAAGGCCCAGTATGAGGACATCGCCAACCGTAG
CCGGGCTGAAGCTGAGACCATGTACCAGATCAAATACGAGGAGCTGCAGACATTGGCTGA
GAAGCGTGGAAATGACCTCCGTCGCACGAAGATGGAGATTTCTGAGATGAATCGGAGCAT
CAGCCGACTCCAGGCTGAGATTGAGGCCCTCAAAAACCAGAGGGCTGCCCTGGAGGCTGC
CATTGCCAATGCTGAGCAGCGCGGGGAGCTGGCCATTAAGGATGCCAATGGCAAGGTGGC
CGAGCTGGAGGCCGCCCTGCAGCGAGCCAAGCAGGACATGGCCCAGCAGCTGCGTGAGTG
CCAGGAGCTCATGAACGTCAAGTTGGCCCTGGACATTGAGATTGCCACCTACAGCAAGCT
GCTGGAGGGCGAGGAGAGCCGGCTGGAGTCTGGGATGCAGAACATGAGTATCCATACTAA
GACCACCAGTGGCTTCTCAGGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSVRVTQKSYKVSTSGPRAFSSRSYTSGPGSRISSSAFSRVGGSFRGGLNSSMSVVGGYGGGAGGMGGITAVSVNQSLLSPLKLEVDPNIQAVRTQEKEQ
MS.RVTQKSYKVSTSGP.AFS.RSYTS.PGS.ISSSAFS.VGGSF.GGLNSSM.VVGGYGGGA.GMGGITAVSVNQSLL.PLKLEVDPNIQAVRTQEKEQ
Retrocopy
MSIRVTQKSYKVSTSGPQAFSTRSYTSRPGSHISSSAFSWVGGSFQGGLNSSMRVVGGYGGGARGMGGITAVSVNQSLLGPLKLEVDPNIQAVRTQEKEQ


Parental protein
IKTLNNKFASFIDKVRHLEQQNKVLETKWSLLQQQKTARSNIDNMFESYISNLRRQLDTLGQEKLKLEVELGNMQGLVEDFKNKYEEEIKERADMENEFV
IKTLNNK.ASFIDKVRHLEQQNKVLETKWSLLQQQKT.RSNIDNMFESYIS.LR.QLDTLGQEKLKLEVELGNMQGLVEDFKNKYEEEIKERADMENEFV
Retrocopy
IKTLNNKLASFIDKVRHLEQQNKVLETKWSLLQQQKTVRSNIDNMFESYISILRWQLDTLGQEKLKLEVELGNMQGLVEDFKNKYEEEIKERADMENEFV


Parental protein
LIKKDVDEAYMNKVELESRLEGLTDEI-NFLRQLYEEEIRELQSQISDTSVVLSMDNSRSLDLDGIISEVKAQYEDIANRSRAEAETMYQIKYEELQTLA
LIKKDV.EAYMNKVELESRLEGLTDEI.NFLRQLYEEEIRELQSQI.DTSVVLSMDNSRSLDLDGIISEVKAQYEDIANRSRAEAETMYQIKYEELQTLA
Retrocopy
LIKKDVGEAYMNKVELESRLEGLTDEI\NFLRQLYEEEIRELQSQILDTSVVLSMDNSRSLDLDGIISEVKAQYEDIANRSRAEAETMYQIKYEELQTLA


Parental protein
GKHGDDLRRTKTEISEMNRSISRLQAEIEALKNQRAALEAAIADAEQRGELAIKDANGKVAELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRK
.K.G.DLRRTK.EISEMNRSISRLQAEIEALKNQRAALEAAIA.AEQRGELAIKDANGKVAELEAALQRAKQDMA.QLRE.QELMNVKLALDIEIATY.K
Retrocopy
EKRGNDLRRTKMEISEMNRSISRLQAEIEALKNQRAALEAAIANAEQRGELAIKDANGKVAELEAALQRAKQDMAQQLRECQELMNVKLALDIEIATYSK


Parental protein
LLEGEESRLESGMQNMSIHTKTTSGFSG
LLEGEESRLESGMQNMSIHTKTTSGFSG
Retrocopy
LLEGEESRLESGMQNMSIHTKTTSGFSG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide