RetrogeneDB ID:
retro_mputfur_900
Organism:
Location:
GL896967.1:885128-885520 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.15 %
Coverage:
94.24 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_900
TGTGTTCTAGGGTTAATGCTGTCACCACCTTAGTGGCAAACAATAGAGCTCAGCGGGTAG
TAATTGCACATGATGTGGATCCCATTGAATTAGTTGTCTTCCTTCCTGCTCTGTATTGTA
AGACAGGGATTCCTTATGCCATTATCAACAGGAAGGCCAGCCTGGGGCATCTAGTCCACA
ACTAGGCCTGCACCACTATCACATTCAGACAGTTTAACCCAACAGACAAAAGAGCTCTGG
CTAAGGTGGCCAAAGCTTTCAGAACCAATTCCAGTGACAGATATGACGAGATTCATTGTC
ACGAGGGAGGCAACATCCTGAGTCCAAGGTTGGTGGTTTGCATTTCCAAGTTGAAGGAGG
AAAAGGCTAAAGAACAGGCCACCAAACTGGGC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
CVLG-VNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNERYDEIR
CVLG.VN.VTTLV.N..AQ.VVIAHDVDPIELVVFLPAL..K.G.PY.II..KA.LG.LVH...CTT..F.Q.N..DK.ALAK...A.RTN...RYDEI.
Retrocopy
CVLG/VNAVTTLVANNRAQRVVIAHDVDPIELVVFLPALYCKTGIPYAIINRKASLGHLVHN*ACTTITFRQFNPTDKRALAKVAKAFRTNSSDRYDEIH


Parental protein
RHWGGNVLGPKSVARIAKLEKAKAKELATKLG
.H.GGN.L.P..V..I.KL...KAKE.ATKLG
Retrocopy
CHEGGNILSPRLVVCISKLKEEKAKEQATKLG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide