RetrogeneDB ID:
retro_mputfur_904
Organism:
Location:
GL896968.1:5781886-5782255 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
86.18 %
Coverage:
76.4 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_904
ACTTCCAAGTTGGCTACTCTCCCTGAGAAACCTCCTGTTACCAACTGGGCTTACTACAAG
GCCAATGTGGTGAAGGCTGGCTTGGTAGATGACCTTGAGAAGAAGTTCAATGCCCTGAGG
ATTCCTGTGCCAGAGGATAAATACACTGTTCAGGTGGATGCTGAAGGAAAAGAAGATGTG
AAAAGTTGTGCTGAGTTTTTGTCTGTCTCAAAGGCCAGGATTGTGGAATACGCAAAACAG
CTGGAGAAGCTAAGGAACATAATTCTGTTTGATTAGATGACCATTGAGGACATGAGTGAA
GCCTTCCCAGAAACCAAATTAGACAAGAAGAAGAATCTCTATTGGCTTCACAAGCCAACC
GAAAATTTA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
TSKLATLPEKPPAIDWAYYKANVAKAGLVDDFEKKFNALKIPVPEDKYTVQVDAEEKEDVKSCAEFLSLSKARIVEYEKQLEKLRNIIPFDQMTIEDLNE
TSKLATLPEKPP...WAYYKANV.KAGLVDD.EKKFNAL.IPVPEDKYTVQVDAE.KEDVKSCAEFLS.SKARIVEY.KQLEKLRNII.FD.MTIED..E
Retrocopy
TSKLATLPEKPPVTNWAYYKANVVKAGLVDDLEKKFNALRIPVPEDKYTVQVDAEGKEDVKSCAEFLSVSKARIVEYAKQLEKLRNIILFD*MTIEDMSE


Parental protein
AFPETKLDKKKYPYWPHKPIENL
AFPETKLDKKK..YW.HKP.ENL
Retrocopy
AFPETKLDKKKNLYWLHKPTENL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide