RetrogeneDB ID:
retro_mputfur_911
Organism:
Location:
GL896970.1:2431055-2431346 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
72.0 %
Coverage:
51.04 %
Frameshifts:
2
Stop codons:
4


Parental gene:
Parental gene symbol:
RAC2
Parental gene aliases:
No gene alias available
Parental gene description:
ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) [Source:HGNC Symbol;Acc:9802]

Genomic region (view in browser)





>retro_mputfur_911
TTTTCTGGGGGATATATTCCCACTGTCTTTGACAACAACTCTGCCAATATTCTGGTAGAT
GGAAAACCAGTGAATCTGGGCTTATGGGATATAGCTGGACAAAATTAGGATAGATGAAGA
CCCTTATCCTATCTGCAAACAGATGTGTTCTTAATTTGCTTTTCTCTCAGGGAGTCCTGC
ATCATTTGAAAATGTTCAAGCAGAGTGGTACCCTTAAGTATGACGTCACTGTCCCAACAC
CCGCATCATCTTGGTGGGGACTAAACTTGATTCAGGGGTGACAAAGAATCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
FPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSL-VSPASYENVRAKWFPEVRHHCPSTPIILVGTKLD-LRDDKDT
F.G.YIPTVFDN.SAN..VD.KPVNLGLWD.AGQ...DR.RPLSY.QTDVFLICFSL..SPAS.ENV.A.W.P.V..HCP.T.IILVGTKLD..R.DK..
Retrocopy
FSGGYIPTVFDNNSANILVDGKPVNLGLWDIAGQ-N*DR*RPLSYLQTDVFLICFSL\GSPASFENVQAEWYP*V*RHCPNTRIILVGTKLD/FRGDKES


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide