RetrogeneDB ID:
retro_mputfur_912
Organism:
Location:
GL896970.1:2570220-2570696 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
67.08 %
Coverage:
87.91 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_912
GAGTGCACAGCCAGCATCCTGGCCATGGCCAATCTGGAGCGGAGGATTATGCTATCAAGC
TGGACAGTGTATAGTGTGCCCTGGTGGGTGAGATCATCGGGCACTTGGAGCAGCAGGGGT
TCCATCTCATGGCCATGAAGCTCCTACAGGCCTCTGAGGAACTCCTGAAGCAGCACTCCA
TTGACCTGAAGGACCACCCATTCTTCCCAGGGCTGCTGAAGCCCATGAGCTGCAGGCCAG
TTGTGGTTATGGTCTGGGTGTGACTGACTGTGGAGAAAACAAAGCAAGTGATGCCTGGGG
AGACCAACTCAGCAGATTCTAAGCCAGGCACCAACCGGGACTTTTGGATTCAAGTTGGCA
AGAGCAACATTCATAGCAGCAATTCAATAGAAAGTACAGAGAAAGAAATCAGCCTGTGGT
TTAAACCTGAAGAACTGGTTGACTACAAGTCTTGTGCTTTTGACTGTATCTATGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EPTCRPQAMAHQERTFI-AIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLQASQELLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRMML
E.T....AMA..ER....AIK.D.V...LVGEII...EQ.GF.L.AMK.LQAS.ELLKQH.IDLKD.PFFPGL.K.M...PVV.MVW..L.V.KT...M.
Retrocopy
ECTASILAMANLERRIM/AIKLDSV*CALVGEIIGHLEQQGFHLMAMKLLQASEELLKQHSIDLKDHPFFPGLLKPMSCRPVVVMVWV*LTVEKTKQVMP


Parental protein
GETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELVDYKSCAFDWIYE
GETN.ADSKPGT.R.DF.IQVG...IH.S.S..S.EKEISLWFKPEELVDYKSCAFD.IYE
Retrocopy
GETNSADSKPGTNR-DFWIQVGKSNIHSSNSIESTEKEISLWFKPEELVDYKSCAFDCIYE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide