RetrogeneDB ID:
retro_mputfur_913
Organism:
Location:
GL896970.1:3449148-3449648 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
66.28 %
Coverage:
87.05 %
Frameshifts:
3
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_913
GTCATCCCGACACCAGCTGCCTCCACCACGCCCCCTAAGTTTGACCCTAGTGGGCTCAAA
GTCACACATCTGAGGTACACCAGTGGTGAGGTCGGCATCTCGCCTGCTCTGGTTCCGAGG
ATCGGCCCCTTGGGGCCAACTCCCAAAAAGGTTGGTGATGACATCATCAAGGCAACTGGT
AATTGGAAGGGTCTGAGGAGGACAGAAGGGAAACTGACCATTCAGAATGGACAGGCCCAG
ACAGAAGGGATACCACGGCCTCCACCCTGATTATCAGAGCCCTCAAGGAACCGCCAAGGG
ACAGAAAGAAGCAGAAAAACACTGAGCACTGTGGGAATACCATTTTTGACGAATCTGTCA
ACCATGTCCGACAGATGTCGCACTGCTCTGAGCCTGAGAACTCTCTGGAACCACTAAAGG
GATCCCAGGGGACTGCCCGGGCTGGGGGCTGCCCTGTGGATGGCCACCATCCTCGTGACA
TCACAGATGACATTGGTAGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VHPTPATSAMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV-KLTIQNRQAQIEVVP-SASALIIKALKEPP
V.PTPA.S..PPKFDP...KV..LR.T.GEVG...AL.P.IGPLG..PKKVGDDI.KATG.WKGLR.T..KLTIQN.QAQ.E..P..AS.LII.ALKEPP
Retrocopy
VIPTPAASTTPPKFDPSGLKVTHLRYTSGEVGISPALVPRIGPLGPTPKKVGDDIIKATGNWKGLRRTEGKLTIQNGQAQTEGIP/TASTLIIRALKEPP


Parental protein
RDRKKQKNSAVKHSGNITFDEIVNIARQMRHRSL-ARELSGTIKEI-LGTAQSVGCNVDGRHPHDIIDDINS
RDRKKQKN....H.GN..FDE.VN..RQM.H.S..A.ELSGT.K.I..GTA...GC.VDG.HP.DI.DDI.S
Retrocopy
RDRKKQKNT--EHCGNTIFDESVNHVRQMSHCSE/A*ELSGTTKGI\QGTARAGGCPVDGHHPRDITDDIGS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide