RetrogeneDB ID:
retro_mputfur_921
Organism:
Location:
GL896972.1:2157502-2157767 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
70.65 %
Coverage:
98.91 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
LAMTOR5
Parental gene aliases:
No gene alias available
Parental gene description:
late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955]

Genomic region (view in browser)





>retro_mputfur_921
ATAGAGGTGACCTTGAAGCAGCATTTGGAGGACATGATGAAGAACCCATCTATTGTTGGT
GTCCTGCACACAGATTCACAGGGACCTAATCTGGGTTGTTGTGGGGCCCCATCAAGTGAA
GCACACTGGGGGGGTACCTGCTCTAGCCCAGCAAGCTGCTGAACTAACCTCAGACCCCAC
GGACTTTCCTGTGGTATCTGTAGAATCAGATAACAGCAACCAGAAATATGATGGCATCAC
AGTGCCAGTGCACAAAGTGGCCTCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MEATLEQHLEDTMKNPSIVGVLCTDSQGLNLGCRGTLSDE-HAGVISVLAQQAAKLTSDPTDIPVVCLESDNGNIMIQKHDGITVAVHKMAS
.E.TL.QHLED.MKNPSIVGVL.TDSQG.NLGC.G..S.E.H.G....LAQQAA.LTSDPTD.PVV..ESDN.N...QK.DGITV.VHK.AS
Retrocopy
IEVTLKQHLEDMMKNPSIVGVLHTDSQGPNLGCCGAPSSE\HTGGVPALAQQAAELTSDPTDFPVVSVESDNSN---QKYDGITVPVHKVAS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide