RetrogeneDB ID:
retro_mputfur_945
Organism:
Location:
GL896977.1:6289697-6289979 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
57.73 %
Coverage:
74.22 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
Gm11808
Parental gene aliases:
No gene alias available
Parental gene description:
predicted gene 11808 [Source:MGI Symbol;Acc:MGI:3649356]

Genomic region (view in browser)





>retro_mputfur_945
ATGGAGAAATTAGTGAAGACCCTGATCAGCAAAGACCATGACCCTCAAGGTCAAGCCCAA
GGACACCATCGAGAAGGTCAAAGCCAAAACCCAAGTCAAGGTGGGAATCCCACCTGATTG
GCAGCCCTTGATTTTTGCAGGCAAACAGCAGAACGATTGTCAAACTCTACCAGTTAACAA
CATCCCAGAATCCAACATGTCCTTGGGCTTTGCCTGAGGGAGGACATCATGGCCCCTTCC
CACCATCAGCATAGCCAGAAACACAACTGCAACAAAATGATC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MQIFVKTL-TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH-LVLRLRGGIIEPSLRQLAQKYNCDKMI
M...VKTL...KT.TL.V.P.DTIE.VKAK.Q.K.GIPPD.Q.LIFAGKQ..D..TL...NI..ES....L.L.LR..I..PS..Q..QK.NC.KMI
Retrocopy
MEKLVKTL\SAKTMTLKVKPKDTIEKVKAKTQVKVGIPPDWQPLIFAGKQQNDCQTLPVNNI-PESNMS/LGLCLREDIMAPSHHQHSQKHNCNKMI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide