RetrogeneDB ID:
retro_mputfur_947
Organism:
Location:
GL896978.1:3001403-3001743 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
53.04 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
3


Parental gene:
Parental gene symbol:
ATP5G2
Parental gene aliases:
No gene alias available
Parental gene description:
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842]

Genomic region (view in browser)





>retro_mputfur_947
TCCAGCCTCTTCTTGGTCAGGAGCACCTCTCAGCTGTAGAACCAGTCAGTGTCTACAGTA
CTGCTGAAACAACCAGACACTGACAGATGAGAGTGTCAGCAGCTTGGTAGCCCCATCCCC
TGACCTCACTTACTCCTAGCTGTAGCCTCCCTCTCAGGGGACATTTCAAGGGACGTCAGG
ACAGCAGCCAAGTTCCCTAGGGCTGGGGCTGCCACAAGTAGAGGTGCCTAGCACTGGGAC
TGGAATTGGGATTGTGTTTGGCAGCCTCATCATTGATTTTGCCTGGAACCCTTTCATGAA
GCAACAGCTCTTCTCCTCTGCCTTTCCGGATTTTGCCCTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
STPFLVRSTSQLLSRSLSAVVLKPPETLTDEGLSILAAPRPLTSLIPSRSFQTSAISRDIDTAAKFIGAGAAT-VGVAGSGAGIGTVFGSLIIGYARNPS
S..FLVRSTSQL...S.S.V.LK.P.T...E.......P.P...L..........ISRD..TAAKF..AGAAT.V.V...G.GIG.VFGSLII..A.NP.
Retrocopy
SSLFLVRSTSQL*NQSVSTVLLKQPDTDR*ECQQL-GSPIP*PHLLLAVASLSGDISRDVRTAAKFPRAGAAT\VEVPSTGTGIGIVFGSLIIDFAWNPF


Parental protein
LKQQLFSYAILGFAL
.KQQLFS.A...FAL
Retrocopy
MKQQLFSSAFPDFAL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide