RetrogeneDB ID:
retro_mputfur_95
Organism:
Location:
GL896975.1:1568171-1569221 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
80.0 %
Coverage:
99.43 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
Rnf167
Parental gene aliases:
No gene alias available
Parental gene description:
ring finger protein 167 [Source:MGI Symbol;Acc:MGI:1917760]

Genomic region (view in browser)





>retro_mputfur_95
ATGCACCCCGCGGCCTTCCTGCTTTGCACGCTTGTAGCCACTTTGCTGTGGGGAGTGGTC
CCCATCCAGGGGCTCGTTCGAGCGATTTCTGACCACAATAACAGCATGGACTTTGCAGAC
CTTCCAGCTCTTTTTGGGTCTGCCTTGAGCCACGAGGGACTTCAGGGGTTCCTTGTGGAG
GCTCAGCCGGCCAACGCCTGCAGCCCAGTTGCTTCGCCACCCCCAGCTGCGGTCAACGGG
TCAGTCTTTATTGCACTTCTTCGGAGATTCGACTGCAACTTTGACCTCAAGGTCCTAAAT
GTTCAGAAGGCTGGGTATGGTGCAGCTGTAGTACACAATGTAAATTCCAACGAACTTCTG
AATATGGTGTGGAACAGTGAGGAAATCCAGCAGCAGATCTGGATCCCGTCTGTGTTTATT
GGGGAAAGGAGTTCCAAGTACCTGCGTGCTCTCTTCGTCTACGAGAAGGGAGCTCAAGTG
CTCCTGGTCCCAGACAGTAACTACCTCCTGGGCTTCTGTCTCATCCCTTTCACAGGGTTT
ATGGGACTGCTGATTTTGGCCATGGGAGCAGGGCTGATAGTTCGTTTTATCCATCACCAG
AAACAGCTCCAGCAGAATCGGCTGACCAAAGAGCAACTGAAGCAGATTCCTATACATGAC
TATCAGAAAGGAGACCACTACGACGTCTGTGCCATCTGCCTGGACGAATATGAGGATGGA
GACAAGCTGAGGGTACTTCCCTGTGCTCATGCTTATCACAGCCGCTGTGTGGACCCCTGG
CTCACTCAGACCCGGAAGACCTGCCCCATCTGCAAGCAGCCTGTTCACAGGGGTCCTGGA
GAAGGGGAGGAGGAGGAAGCAACTCAGGGGCAAGGGGGTGATGAAGAAGGGGAGCCAAGG
GACCACCCTGCCACAGAACGGACCCCCCTTCTGGGCTCCAGCCTCACACTTCCCACATCC
TTTGGCTCCCTAGCCCCAGCCCCCCTTGTTTTTCCTGGGTCTTCAATAGCTCCATCACCA
TCTCCATCCTCTTCTTCCTCTTCTGCTGTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MRPAAFPLPVVVAAVLWGAAPARGLIRATSDHNASMDFADLPALFGASLSQEGLQGFLVEAQPANACSLIAPPPPAPVNGSVFIALLRRFDCNFDLKVLN
M.PAAF.L...VA..LWG..P..GL.RA.SDHN.SMDFADLPALFG..LS.EGLQGFLVEAQPANACS..A.PPPA.VNGSVFIALLRRFDCNFDLKVLN
Retrocopy
MHPAAFLLCTLVATLLWGVVPIQGLVRAISDHNNSMDFADLPALFGSALSHEGLQGFLVEAQPANACSPVASPPPAAVNGSVFIALLRRFDCNFDLKVLN


Parental protein
AQKAGYGAAVVHNVGSNELLNMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNSFPLGYYLIPFTGIVGLLVLAMGAVMVVRCIQHR
.QKAGYGAAVVHNV.SNELLNMVWNSEEIQQQIWIPSVFIGERSS.YLRALFVYEKGA.VLLVPD....LG..LIPFTG..GLL.LAMGA...VR.I.H.
Retrocopy
VQKAGYGAAVVHNVNSNELLNMVWNSEEIQQQIWIPSVFIGERSSKYLRALFVYEKGAQVLLVPDSNYLLGFCLIPFTGFMGLLILAMGAGLIVRFIHHQ


Parental protein
KRLQRNRLTKEQLRQIPTHDYRKVPGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGD-EDEDETQGQEGDEEGE
K.LQ.NRLTKEQL.QIP.HDY.K..GD.YDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPG..E.E..TQGQ.GDEEGE
Retrocopy
KQLQQNRLTKEQLKQIPIHDYQK--GDHYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGEGEEEEATQGQGGDEEGE


Parental protein
PRDHPASERTPLLGPSPTPPASFGSLAPTSPVLPGSSTDPPPAPPSSSAA
PRDHPA.ERTPLLG.S.T.P.SFGSLAP...V.PGSS..P.P.P.SSS..
Retrocopy
PRDHPATERTPLLGSSLTLPTSFGSLAPAPLVFPGSSIAPSPSPSSSSSS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide