RetrogeneDB ID:
retro_mputfur_951
Organism:
Location:
GL896980.1:4934285-4934579 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
60.0 %
Coverage:
71.53 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
RPL28
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L28 [Source:HGNC Symbol;Acc:10330]

Genomic region (view in browser)





>retro_mputfur_951
ACTGAGCCCAGTAACCCGAAGTCTCACATCTCCTTCTTCTCTAAGGGGCTGATTCACTGC
AAGACTGTGGGTATGGAGCCTGGTGGGCAGAGGGAAATGTGTAGTGGTGATCTTGTAGTG
CAGATCCCTCCAGGGAAATCCTGCCACCTCCTACATGCAAACCGCCATTAACAAGACTGC
TCGGGCCACCCTCAGCAACATCGGACACGTGATCTACAAGAACAATTACAGCCCAGACCT
GTGCGTGGCTGCAGTTTACAGAGCCAGTGCCATCCGTGCAGCCAGAAGCCTGTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
TEPNNLKARNSFRYNGLIHRKTVGVEPAAD-GKGVVVVMKRRSGQRKPATSYVRTTINKNARATLSSVRHMIRKNKYRPDLRMAAIRRASAILR-SQKPV
TEP.N.K...SF...GLIH.KTVG.EP....GK.VVV....RS.Q..PATSY..T.INK.ARATLS...H.I.KN.Y.PDL..AA..RASAI...SQKPV
Retrocopy
TEPSNPKSHISFFSKGLIHCKTVGMEPGGQ\GKCVVVIL*CRSLQGNPATSYMQTAINKTARATLSNIGHVIYKNNYSPDLCVAAVYRASAIRA/SQKPV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide