RetrogeneDB ID:
retro_mputfur_952
Organism:
Location:
GL896980.1:2764504-2765029 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
62.78 %
Coverage:
100.0 %
Frameshifts:
4
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_952
ATGAGCTTCCAGGCATATCAGAATCATTCCATCAAGGTGAAGGCCAGCAACAACAACCTA
ATCAACATGCTTCTATGGGCCTCCTACACCTACTTCTCTCTAGGATTCTATTTTGACGAT
GATTATGTGGCTCTGGGGGGCACAGGCCGCTTCTGTGAGTCACTTGGCTGAGGAGAAGTG
TGAGGACACTGAGCATCTCTTGAAGATGCAAAACCACCACAGTGGGTGCATCCTCTTCGA
GGACTGCAGAAGCCACCCAAGAGGAGTGGGGTTAAACTCTGGATGCCAAGGAAGCCACCC
TGGCTTTGGAGAAGATCCTGAACCAAGCCCTTTTACATCTTTACATATGTCTTGGGTTCT
GCTCTTGCAGATTCCCATCTCTGTAACTTTCTGATGAATCACTTCTTGGATGAAGAGGTG
AAACTGAGGAAGATGGGTAACCACCCAATTAAGCTCTGCAGACTGGGCAGCCCTCAGGCT
GGGCTGGATGAGGATCTCTTCCAAAGGCTAATTCTCAAACACAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSSQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHF-FRELAEEKREGAERLLKMQNQRGGRALFQD-VQKP-SQDEWGKTLDAM
MS.Q..QN.S..V.A..N.L.NM.L.ASYTY.SLGFYFD.D.VAL.G.G.F....LAEEK.E..E.LLKMQN...G..LF.D..QKP..Q.EWG.TLDA.
Retrocopy
MSFQAYQNHSIKVKASNNNLINMLLWASYTYFSLGFYFDDDYVALGGTGRF\VSHLAEEKCEDTEHLLKMQNHHSGCILFED/LQKP/TQEEWG*TLDAK


Parental protein
EAALVLEKSLNQALLDLH-ALG-SARTDPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLAGPQAGLGEYLFERLTLKHD
EA.L.LEK.LNQALL.L...LG.SA..D.HLC.FL.NHFLDEEVKL..KMG.H...L.RL..PQAGL.E.LF.RL.LKH.
Retrocopy
EATLALEKILNQALLHLYICLG\SALADSHLCNFLMNHFLDEEVKL-RKMGNHPIKLCRLGSPQAGLDEDLFQRLILKHN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide