RetrogeneDB ID:
retro_mputfur_959
Organism:
Location:
GL896981.1:4484713-4484979 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
56.67 %
Coverage:
55.28 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
TMEM138
Parental gene aliases:
No gene alias available
Parental gene description:
transmembrane protein 138 [Source:HGNC Symbol;Acc:26944]

Genomic region (view in browser)





>retro_mputfur_959
GAGGCGGCACTGGGCAACTCTGTATTCCATAAGTTCAAAGGGACCGCCCTCCTCACAGCT
AAGTTCTTCGCCCCCAGCATCTTCCTTCAGGTCTGGGTCATGACTTTACACTGGAAAAAT
TCCCAACTGCTTTGTCAGGACAAAGGGACTTCAAACTCTATATTCTGGAGACTAGCATGG
CAGTGTTATATGGTTACTTCTGTAAATGGACAGCTGTGAGACTGGGTGATCCTCACTCCT
ACCAGGACTCTTTATGCCTGCACAAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QAGLVNLLFHKFKGTIILTAVYFALSISLHVWVMNLRWKNSNRFVWTDGLQT-LFVFQRLAAVLYCYFYKRTAVRLGDPRFYQDSLWLRK
.A.L.N..FHKFKGT..LTA..FA.SI.L.VWVM.L.WKNS.......G....L.......AVLY.YF.K.TAVRLGDP..YQDSL.L.K
Retrocopy
EAALGNSVFHKFKGTALLTAKFFAPSIFLQVWVMTLHWKNSQLLCQDKGTSN/LYILETSMAVLYGYFCKWTAVRLGDPHSYQDSLCLHK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide