RetrogeneDB ID:
retro_mputfur_961
Organism:
Location:
GL896981.1:4932791-4933084 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
66.67 %
Coverage:
53.26 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
TDGF1
Parental gene aliases:
No gene alias available
Parental gene description:
teratocarcinoma-derived growth factor 1 [Source:HGNC Symbol;Acc:11701]

Genomic region (view in browser)





>retro_mputfur_961
CAGTCTCGGGAGGAGCCTGCTTCTTGCCATTGGTCTTTCCAGTCTGTGCTGTCCATAGGA
ATCCAGGACACTAAGGAGCTAAACAAACCTGCTGTCTGAATGAGGGAACCTTCATGCTTT
GGTCCTTCTGTGGCTGCCCTCCCTCCTCCTATGGCTGGCACTGTGAGCACAAGTGGAGCA
AAGAGAACTATGAGTCTGTGCCCTGTGACACCTGGTTGCCCAAGAAATGTTCCAAGTGTA
AAAGCTGGCATGGCCTGCTTCACTTCTTTCCTCAGACATTTCTACCAGGTTGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RSREEPAVRHRSSPFVPTLGIQDSKELNR-TCCLNGGTCMLGSFCACPPSFYGRNCEHDSRKENCESVPHDTWLPRRCSMCKCWRGRLHCFRQTFLPGC
.SREEPA..H.S...V...GIQD.KELN..TCCLN.GT.ML.SFC.CPPS.YG..CEH...KEN.ESVP.DTWLP..CS.CK.W.G.LH.F.QTFLPGC
Retrocopy
QSREEPASCHWSFQSVLSIGIQDTKELNK/TCCLNEGTFMLWSFCGCPPSSYGWHCEHKWSKENYESVPCDTWLPKKCSKCKSWHGLLHFFPQTFLPGC


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide