RetrogeneDB ID:
retro_mputfur_970
Organism:
Location:
GL896982.1:7047770-7048248 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
64.02 %
Coverage:
99.39 %
Frameshifts:
2
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_970
ATGGCCAAGTCCAAGAATCACACCACGCACAACCAGTCATGAAAACGGCACAGAAATGGC
ATCAGAAGACCCTAGTCACAAAGATATGAATCTCTTAAGAGGTAGAACCCAAGTTCCTGG
GGAACGTGCGTGTTGCCAAGGTACACAGGAAGAGTTTGAAGAAGACGCAGGCCAACAATA
CCAAGGCCACGAGTGCATGTGCCGAGGCTACCAAGGCTCTTGTCAAGGCCAAGGGGGTCA
AGCCCACGATCCCAAAGAACAGCAGCCACGAGCTCAGTTGATTTGCCTGTATTGCTCACT
CCAAGCTGGGGAAGCATGCTCAGGCCGCATTGCCAAGGGTCTCGGGCTCTGCCGGCCAAA
GGCCAAGGCCGAGACACAAACCAAGGTGCAGGCTACAGCACCTCCCACAGTGGCCCAGGC
CCCCACAAAAGCTCTGGCAGAGAGGGTTCTGCCTGCCAGTGTGATGACAAGGGGACCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLK-GVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAEAIKALVKPKEVKPKIPKGGSRKLNRLAYI
MAKSKNHTTHNQS.K.HRNGI..P.SQRYESLK..V.PKFL.N.R.AK.H..K.LKK.QANN.KA.SA.AEA.KALVK.K.VKP.IPK..S..L...A.I
Retrocopy
MAKSKNHTTHNQS*KRHRNGIRRP*SQRYESLK/EVEPKFLGNVRVAKVH-RKSLKKTQANNTKATSACAEATKALVKAKGVKPTIPKNSSHELS*FACI


Parental protein
AHPKLGKRARA-RIAKGLRLCRPKSKAKAQTKAQASAATPAPAPAPAPAAAQTPKGAQAPTKAP
AH.KLGK.A.A.RIAKGL.LCRPK.KA..QTK.QA..A.P..A.AP..A.A.....A...T..P
Retrocopy
AHSKLGKHAQA/RIAKGLGLCRPKAKAETQTKVQAT-APPTVAQAPTKALAERVLPASVMTRGP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide