RetrogeneDB ID:
retro_mputfur_976
Organism:
Location:
GL896983.1:4028968-4029437 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
74.05 %
Coverage:
64.88 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
MRPS7
Parental gene aliases:
No gene alias available
Parental gene description:
mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:14499]

Genomic region (view in browser)





>retro_mputfur_976
TTTGAAGACCCAGTCAGTAAATTCACCACTATGATTATGAAAGGAGGAAACAAAATACTG
GCCAGATCCCTCGTGATGCAGACTCTGGAAGCTGGAAAAGGGAAGGAGTTTGAGAAGTAC
AATGTTGCTTCTGCAGAGGAACAGGCAACCATCCAGCACAACCCCTTCACCAGCTTCCAC
CAAGTACTGAAGAACTATGAGCCTGTGATTGGGTTGGTACCCACCTTCAGAGGTGGCCAT
TTCTACCAAGACCCTATGTCACTAGATGATCGGGGTCATCGTTTTCCTGATAATGAAGTG
GATGATTACTGAGTGCCGGGAGAAGAAGCACTGGTGGATGCTGATGCTAGAGAAGCTGTC
ACATGAGCTGCTGGAGGCTTTTCACAAACAGGGCCCTGTGGTCAAGAAGAAGCATGACAT
GCACAATATGGTGGAGGCCATCCATGCCCTGGCTCACTATTGCTGGTGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
FEDPVISKFINMMMKGGNKVLARSLMTQTLEAVKRKQFEKYHAASAEEQATIERNPYTIFHQALKNCEPVIGLVPILRGGHFYQVPVPLPARRRR-FLAM
FEDPV.SKF..M.MKGGNK.LARSL..QTLEA.K.K.FEKY..ASAEEQATI..NP.T.FHQ.LKN.EPVIGLVP..RGGHFYQ.P..L..R..R.FL.M
Retrocopy
FEDPV-SKFTTMIMKGGNKILARSLVMQTLEAGKGKEFEKYNVASAEEQATIQHNPFTSFHQVLKNYEPVIGLVPTFRGGHFYQDPMSLDDRGHR\FLIM


Parental protein
KWMLTECREKKHRRTLMPEKLSHELLEAFHNQGPVIKKKHDMHKMAEANRALAHYRWW
KWM.TECREKKH...LM.EKLSHELLEAFH.QGPV.KKKHDMH.M.EA..ALAHY.WW
Retrocopy
KWMITECREKKHWWMLMLEKLSHELLEAFHKQGPVVKKKHDMHNMVEAIHALAHYCWW


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide