RetrogeneDB ID:
retro_mputfur_977
Organism:
Location:
GL896983.1:6848326-6848694 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
59.68 %
Coverage:
62.18 %
Frameshifts:
1
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_977
TCTTCCTGAATCCAGGTTCATCCAACACCAGCTGCCTCCGCCCTGCCACCTAAGTTGGAC
CTCGAGGAGATAAGAGTGGCATACCTGAGGTGTACAGGTGGGGAAGTGGGTGGTGTGTCT
GTCCGAGCCCCAAAGATTGCCCCCTCCCAGGTCTCTCTCTGAAAATGTTGGGGGCATACC
GTCGCTAAAGCAACTGGTGATGGAAGCACCTGAAGATTATGGTGAAACTCAGCATTCAGA
ACAGACAGATCTAGATTAAGGTGCTACCTTCTGCCTCTACCCTGATTATCAAAGCCCTCA
AGGAAGCACCGAGAGCCGGAAACATTCAGTCCAGTAGAAATAGGACTTTCAGTGAGACTG
CTAACATT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SSRIRVHPTPATSAMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKV-GDDIAKATGD-WKGLRITVKLTIQNRQAQIEVVPSASALIIKA
SS.I.VHPTPA.SA.PPK.D..EI.V.YLRCTGGEVG..S..APKI.P...S..K..G...AKATGD.WK.L.I.VKL.IQNRQ..I.V.PSAS.LIIKA
Retrocopy
SS*IQVHPTPAASALPPKLDLEEIRVAYLRCTGGEVGGVSVRAPKIAPSQVSL*KCWGHTVAKATGD/WKHLKIMVKLSIQNRQI*IKVLPSASTLIIKA


Parental protein
LKEPPR--DRKKQKNSAVKHSGNI
LKE.PR........N.......NI
Retrocopy
LKEAPRAGNIQSSRNRTFSETANI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide