RetrogeneDB ID:
retro_mputfur_979
Organism:
Location:
GL896983.1:4030747-4031182 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
91.03 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
2


Parental gene:
Parental gene symbol:
UBE2V2
Parental gene aliases:
No gene alias available
Parental gene description:
ubiquitin-conjugating enzyme E2 variant 2 [Source:HGNC Symbol;Acc:12495]

Genomic region (view in browser)





>retro_mputfur_979
ATGGCGGTCTTCACAGGAGTTAAAGTTCCTCGTAATTTTTGCTTGTTGGAAGAACTTGAA
AAAGGACACAAAGGAGTAGGTGATGGTATGGTTAGCCGGGGCCTTGAAGATGATGAAGAT
ATGACACTTATGAGGTGGACAGGCATGATTATTGGGACACCAAGGACAAATTATGAAAAC
CGAATATATAGCCTGAAATTAGAATGTGGACCTAAATACCCAGAAGATCCTCCATCAGTT
AGATTAGTAACCAAAATTAATATGAATGGAATTAATAATTCCAGTGGAATGGTGGATGCA
CGGAGCATACCAGTGTTAGCAAAATGGCAAAATTCATAGAGCATTAAAGTTGTACTTCAA
GAGCTAAGACGTCTAATGATGTCCAAAGAAAATATGAAGCTTCCATAGCCACCAGAAGGA
CAAACATACAACAAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDA
MAV.TGVKVPRNF.LLEELE.G.KGVGDG.VS.GLEDDEDMTL.RWTGMIIG.PRTNYENRIYSLK.ECGPKYPE.PPSVR.VTKINMNGINNSSGMVDA
Retrocopy
MAVFTGVKVPRNFCLLEELEKGHKGVGDGMVSRGLEDDEDMTLMRWTGMIIGTPRTNYENRIYSLKLECGPKYPEDPPSVRLVTKINMNGINNSSGMVDA


Parental protein
RSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN
RSIPVLAKWQNS.SIKVVLQELRRLMMSKENMKLP.PPEGQTYNN
Retrocopy
RSIPVLAKWQNS*SIKVVLQELRRLMMSKENMKLP*PPEGQTYNN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide