RetrogeneDB ID:
retro_mputfur_982
Organism:
Location:
GL896985.1:6904372-6904777 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
73.91 %
Coverage:
65.38 %
Frameshifts:
2
Stop codons:
2


Parental gene:
Parental gene symbol:
RPL7
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L7 [Source:HGNC Symbol;Acc:10363]

Genomic region (view in browser)





>retro_mputfur_982
AGGTGTTGCAGCTTCTTCAATGGCACCTTTGTTAAGCTCAACAAAGCTTCAGTTAACATG
CTCAGAACTGTGGAACCATATATAGCATGGGGGGACCCACCCCTGAAGTGGTAAATGAAT
TGATCTAAGAGTGTGGTGAAGGCAAAATCAACAAGTGAGTTGCCCTGACAGGTGATACAG
TGATTGCTCAATATCTTGGTAAGTATGGCATCATCTGCATGGAGGATCTGATTCAGCAGA
TCCGTACGGCTGGAAAATATTTCGAAGAAGCAAACAACTTTTTATTGACCTTCAAGCTAT
CTTCTCCTCAAAAGGGAATGAAGGAAAAAGACCACCCATTTTACAGAAGGTAGACATGCT
GGTAACAGGGAAGACCAGATCAATAGGCATATTAGAAGGATGAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLK-SVNELIYKRGYGKINKKRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPF
R....FNGTFVKLNKASVNMLR.VEPYIAWG.P.LK..VNELI...G.GKINK...ALT..T.IA..LGKYGIICMEDLI..I.T.GK.F.EANNFL..F
Retrocopy
RCCSFFNGTFVKLNKASVNMLRTVEPYIAWGDPPLK/VVNELI*ECGEGKINK*-VALTGDTVIAQYLGKYGIICMEDLIQQIRTAGKYFEEANNFLLTF


Parental protein
KLSSPRGGMK-KKTTHFVEGGDAGNREDQINRLIRRMN
KLSSP..GMK.KKTTHF.EG..AGNREDQINR.IRRMN
Retrocopy
KLSSPQKGMK\KKTTHFTEGRHAGNREDQINRHIRRMN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide