RetrogeneDB ID:
retro_mputfur_983
Organism:
Location:
GL896985.1:6985839-6986058 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
55.13 %
Coverage:
59.69 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
COX5B
Parental gene aliases:
No gene alias available
Parental gene description:
cytochrome c oxidase subunit Vb [Source:HGNC Symbol;Acc:2269]

Genomic region (view in browser)





>retro_mputfur_983
AGGCCGTCAGGGCCCAAGGTCTCAATGCAGTCCCTGCAGTCCGTGGCATCTGGAAATGGT
GCTCCTACTGATGGCAAGCAGGTAAAAGGACTGGAGAGGAAGGCTGAACAGCAGGGACTG
GATCCATATAATTTGCTAGACCCAAAGGCAGCTTCAGGCACCAAGGAAGTCCCTAATTTA
GTCCCATCTATCACCAAATAAATGGGCTGCATCCACGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RARGPN-GVAAVRTMASRGGIPTDDDQATGLEREVMMAARKGLDPYNLLAPKAAAGTKEDPNLVPSITNKRIVGCICE
R..GP..........AS..G.PTD..Q..GLER....A...GLDPYNLL.PKAA.GTKE.PNLVPSIT.....GCI.E
Retrocopy
RPSGPKVSMQSLQSVASGNGAPTDGKQVKGLERK---AEQQGLDPYNLLDPKAASGTKEVPNLVPSIT--K*MGCIHE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide