RetrogeneDB ID:
retro_mputfur_988
Organism:
Location:
GL896986.1:5646603-5647140 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
92.74 %
Coverage:
68.06 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_988
GGGTACCGGAAGAAGGTCAGCAGTGACAAGACCAGAGAGAATTTCCGTCTGATCTATAAT
ACCAAGGGTCGCTTTGCTGTTCATCGGATTACACTCGAGGAGGCCAAGTACAAGTTGTGC
AAAGTGAGAAAGATCTTTGTGGGGACAAAAGGCATCCCTCATCTGGTGACTCACGATGCT
CGCACCATCCGCTATCCTGATCCCCTCATCAAGGTCAATGACACCATTCAGATTGATTTG
GAAACTGGAAAGATTACTGATTTCATCAAGTTTGACACTGGTAATCTGTGTATGGTGACT
GGGGGTGCTAACCTGGGAAGAATTGGTGTGATCACCAACAGAGAGAGACACCCTGGTTCG
TTTGATGTGGTTCATGTGAAAGATGCCAATGGCAACAACTTTGCCACCCGACTCTCCAAC
ATTTTTGTTATTGGCAAAGGCAACAAACCATGGATTTCTCTTCCCCGTGGAAAGAGTATC
CGCCTCACCACTGCTGAAGAGAGAGACAAGAGACTGGTGGCCAAACAGAGCAGCGGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GFMDVISIDKTGENFRLIYDTKGRFAVHRITLEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT
G.....S.DKT.ENFRLIY.TKGRFAVHRITLEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT
Retrocopy
GYRKKVSSDKTRENFRLIYNTKGRFAVHRITLEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT


Parental protein
GGANLGRIGVITNRERHPGSFDVVHVKDANGNSFAPRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG
GGANLGRIGVITNRERHPGSFDVVHVKDANGN.FA.RLSNIFVIGKGNKPWISLPRGK.IRLT.AEERDKRL.AKQSSG
Retrocopy
GGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKSIRLTTAEERDKRLVAKQSSG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide