RetrogeneDB ID:
retro_mputfur_99
Organism:
Location:
GL897261.1:507835-508246 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
95.59 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
H3F3B
Parental gene aliases:
No gene alias available
Parental gene description:
H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765]

Genomic region (view in browser)





>retro_mputfur_99
ATGGCCCGCACGAAGCAGACGGCGCGCAAGTCCACAGGCGGCAAGGCTCCACGCAAGCAG
CTGGCCACGAAAGTGGCCCGGAAGAGCGCGCCGGCAACAGGCGGCGTTAAGAAGCCACAC
CGCTACCGGCCTGGCACGGTGGCTCTGCGTGAGATCCGGCGGTACCAGAAGTCCACCGAG
CTGCTGATCCGCAAGCTGCCGTTCCAGCGGCTGGTGCGTGAAATCGCGCAGGACTTCAAG
ACCGACCTGCGCTTCCAGAGCTCGGCCGTCACGGCACTGCAGGAGGCGTGTGAGGCCTAT
CTGGTTGGGCTGTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGGGTCACCATC
ATGCCCAAGGACATCCAGCTGGCGCGCCGCATTCGCGGGGAGCGCGCCTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAY
MARTKQTARKSTGGKAPRKQLATK.ARKSAP.TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS.A..ALQEA.EAY
Retrocopy
MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVTALQEACEAY


Parental protein
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Retrocopy
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide