RetrogeneDB ID:
retro_mputfur_991
Organism:
Location:
GL896987.1:1888342-1888823 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
91.41 %
Coverage:
100.0 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL21
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]

Genomic region (view in browser)





>retro_mputfur_991
ATGACCAACACAAAGGGAAAGAGGAGAGGTACCCGGTACATGTTTTCTAGGCCTTTTAGA
AAACATGGAGTTGTTCCTTTGGCCACATACATGCAAATCTACAAGAAAGGTGATATTGTG
GACATCAAGGGAATGGGCACTGTTCAAAAGGGAATGCCCCACAAATGTTACCATGGCAAA
ACTGGAAGAGTCTACAATGTTACTCAGCATGCTGTTGGTATTGTTGTAAACAAACAAGTT
AAGGCAAGATTCTTGCCAAGAGAATTAATGTCTGCATTGAGCATATTAAACATTCAAAGA
GCCGAGATAGCTTCCTGAAGCGTGTAAAGGAAAATGATCAGAAAAAGAAGGAAGCCAAAG
AGAAAGGTACTTGGGTTCAGCTGAAGCGTCAGCCTGCTCCACCCAGAGAAGCACATTTCA
TGAGAACCAATGGAAAAAAGAGCCCGAACTGCTGGAACACATTCCCTATGATTTCATGGC
A


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVK-GKILAKRINVRIEHIKHS
MTNTKGKRRGTRYMFSRPFRKHGVVPLATYM.IYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVK.GKILAKRINV.IEHIKHS
Retrocopy
MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMQIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVK/GKILAKRINVCIEHIKHS


Parental protein
KSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKE-PELLEPIP-YEFMA
KSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHF.RTNGK..P......P.Y.FMA
Retrocopy
KSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFMRTNGKKSPNCWNTFP/YDFMA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide