RetrogeneDB ID:
retro_mputfur_999
Organism:
Location:
GL896989.1:3814388-3814672 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
90.62 %
Coverage:
60.51 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
UXT
Parental gene aliases:
No gene alias available
Parental gene description:
ubiquitously-expressed, prefoldin-like chaperone [Source:HGNC Symbol;Acc:12641]

Genomic region (view in browser)





>retro_mputfur_999
ATGGCAACGTCCCCTAAACGGTGGACGCTGGAAGCTACGGGGGAGAAAGTGCTGCGCTAC
GAGGCCTTCATCTGTGACGTGCTACAGCGGGACCTGCGAAAAGTGCTGGACCATCGCGAC
AAGGTATATGAGCAGCTGGCCAAATACCTTCAACTGAGAAATGTCATTGAGCGACTTCAG
GAAGCTAAGCCCTCGGAGTTATATATGCAGGTGGATTTGGGCTTAACTTCTTCATTGACA
CAGTTGTCTCAGTCACTTCACGAATCTATGTGGCCCTTGGATTT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MATPPKRRALEATGEKVLRYEAFICDVLQRDLRKVLDHRDKVYEQLAKYLQLRNVIERLQEAKHSELYMQVDL-GCNFFVDTVVSDTSRIYVALGY
MAT.PKR..LEATGEKVLRYEAFICDVLQRDLRKVLDHRDKVYEQLAKYLQLRNVIERLQEAK.SELYMQVDL.G.NFF.DTVVS.TSRIYVALG.
Retrocopy
MATSPKRWTLEATGEKVLRYEAFICDVLQRDLRKVLDHRDKVYEQLAKYLQLRNVIERLQEAKPSELYMQVDL/GLNFFIDTVVSVTSRIYVALGF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide