RetrogeneDB ID:
retro_olat_1
Organism:
Medaka ( Oryzias_latipes )
Location:
11:2686792-2687113 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
71.88 %
Coverage:
74.6 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_olat_1
AATGTTGTTGTGACTCAGCCAGCAGCTAAATCAGTGCAGCTCGGTCAAAAGGTCACTATT
GACTGTAAGGCCAGTCAACAAGTAGCTCACTATTCAGGTTCACAATACTATCTTGCCTGG
TACCATCAGAAATCTGGAGAAGCTCCTAAAGCTCTGATCTACAGAACATCAGACAGATTT
TCAGGAATCTCCTCCAGATTCAGTGGAAGTGGATCAGGAAATGGAATTGACTTCACTCTG
ACCATCAGTGGAGTCCAGGCTGAAGATTCAGGAGTTTATTACTGTCAGAGTTATCACAAT
ATCAACAGTCAGGATGTGTTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
NVVVTQPAAKSVQLNQEVTIDCKASQKMFYESNFCNYIHWYLQKSGEAPKLLIYYATTRQSGVSDRFRGSGSGS--DYTLTISGVQAEDSGVYYCQ
NVVVTQPAAKSVQL.Q.VTIDCKASQ.....S....Y..WY.QKSGEAPK.LIY....R.SG.S.RF.GSGSG...D.TLTISGVQAEDSGVYYCQ
Retrocopy
NVVVTQPAAKSVQLGQKVTIDCKASQQVAHYSGSQYYLAWYHQKSGEAPKALIYRTSDRFSGISSRFSGSGSGNGIDFTLTISGVQAEDSGVYYCQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide