RetrogeneDB ID:
retro_opri_1038
Organism:
Location:
scaffold_61092:4468-4669 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
73.13 %
Coverage:
58.77 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
DNAJC15
Parental gene aliases:
No gene alias available
Parental gene description:
DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:HGNC Symbol;Acc:20325]

Genomic region (view in browser)





>retro_opri_1038
TATTACAGAGGTGGATTTGAACCCAAAATGACAAAACGAGAAGCAGCATTAATCTTAGGT
GTAAGCCCAACTGCCAATAAAGGAAAAATAAGAGATGCACATCGACGAATTATGCTCTTA
AACCACCCAGACAAAGGAGGATCTCCTTATATCGCAGCCAAAATCAATGAAGCTAAAGAT
TTACTAGAAGGTCAAGCTAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
YYKGGFEQKMSRREASLILGISPSAGKAKIKTAHRRIMILNHPDKGGSPYLATKINEAKDVLESTTK
YY.GGFE.KM..REA.LILG.SP.A.K.KI..AHRRIM.LNHPDKGGSPY.A.KINEAKD.LE...K
Retrocopy
YYRGGFEPKMTKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide