RetrogeneDB ID:
retro_opri_111
Organism:
Location:
GeneScaffold_2360:18234-18441 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
72.46 %
Coverage:
87.34 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
CKS2
Parental gene aliases:
No gene alias available
Parental gene description:
CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:2000]

Genomic region (view in browser)





>retro_opri_111
TCAGATAAATATGACGACGAGGAGTTCAAATACTGGCATGTCATGCTGCCCAAGGACATA
GCCAAGCTGGTCCCCAAAACCCGTCCGATGTCTGAGTCTGAATGGAGGAGTCTGGGCGTG
CAGCAGAGTCAGGGATGGGTCCACTACCTGATCCATGAACCAGAGCCCCACATCTTGCTG
TTCCGGAGGCCGCTGCTAAGAAACCAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPHILLFRRPLPKDQ
SDKY.DE...Y.HVMLP....K.VPKT..MSE.EWR.LGVQQS.GWVHY.IHEPEPHILLFRRPL...Q
Retrocopy
SDKYDDEEFKYWHVMLPKDIAKLVPKTRPMSESEWRSLGVQQSQGWVHYLIHEPEPHILLFRRPLLRNQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide