RetrogeneDB ID:
retro_opri_1133
Organism:
Pika ( Ochotona_princeps )
Location:
scaffold_77381:2-1079 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
70.28 %
Coverage:
58.06 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
PABPC4
Parental gene aliases:
No gene alias available
Parental gene description:
poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:HGNC Symbol;Acc:8557]
Genomic region (view in browser)
>retro_opri_1133
ATGAACGTGGCAGCCAAGTACCGCATGGCCTCCCTCTATGTGGGCGACCTCCATCCAGAC
GTCACGGAGGACCTGCTGTTCAAGAAGTTCAGCACGGTGGGACCCGTGCTGTCCATTCGC
GTTTGCAGGGACCTGCTGACCCGTCGCTCCCTGGGCTATGCCTACGTGAACTTCCTGCAG
CTGGCTGATGCCCAGAAGGCGCTGGACACAATGAATTTCGATGTAGTGGAAGGTAGGGCC
ATCCGCCTCATGTGGTCCCAACGCGATGCCTACTTAAGGAAATCTGGAATTGGGAATGTC
TTCATCAAAAACCTCGACAAATCCATCGATAACAAAACCCTGTATGAGTGTTTTTCAGCG
TTTGGGAAGATCCTGTCTTCCAAGGTGATGAGCGACGATCAAGGCTCCAAGGGCTACGCG
TTCGTGCACTTTCAGAACCAGATGGCGGCCGACAGGGCCATCGAGGAGATGAACGGCAAG
TTCCTCAAGGACTGCAAGGTGTTTGTGGGCAGATTCAAACACCGCAGAGATAGGGAGGCT
GAGCTGCGAAAGCACGCCAGTGAGTTCACCAACGTGTACATCAAAAACTTCGGGGACGAT
ATGGACGACGAGAGGCTGAGGGACATCTTCAGTAAATATGGCAGGATTGTGAGTGTTAAG
GTGATGACCAATCCCTATGGGAAATCCAGAGGGTTTGGCTTCGTGAGCTTTGACAGCCAC
GAGGCTGCCAAAAGGGCCGTGGAAGACATGAATGGAGAGGCCATCAACGGGCAGCCCCTC
TTCGTAGGTCGGGCGCAGAAGAAAGTAGAGCGACAGGCTGAGTTAAAACAAATGTTTGAA
CAATTGAAAAAGGAAAAGATTCGCGGGCGCCAGGCAGCAAAACTCTATATTAAGAATCTT
GACGGCAGCATCGACGATGAAAAGCTGCGGCAGGAGTTTGCCTGCTTTGGGTCCGTTAGC
AGAGTGAAGGTGATGCAGGAGGAAGGACTGAGCAAGGGCTTCGGCTTGGTCTGCTTCTCC
TCTGCGGAGGAGGCCAGCCGAGCCATGGCTGAGATGAACGGTCGTATCTTGGGCTCC
Parental protein coverage
Changes in the retrocopy sequence
