RetrogeneDB ID:
retro_opri_1170
Organism:
Location:
scaffold_8487:39415-39685 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
77.78 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
NUTF2
Parental gene aliases:
No gene alias available
Parental gene description:
nuclear transport factor 2 [Source:HGNC Symbol;Acc:13722]

Genomic region (view in browser)





>retro_opri_1170
ATGGGAGAAAAACCAATTTCGGAGCAAATTGGATCCAGCTTCATTCAGCATTACTACCAT
TTACTTGATAATGGCAGAACCCAGCTAGGTGCCATTTTGCTAGCTGCATCATACCTTACT
TGGGAAGGACAGCAGCTCCAAGGGAAAGCTGCCGTTGCAGAGAAGTTGTCTAGCCTTCCC
TTACAGGAAATCCAGCACAGCATCCTGGTGCAGAACCATGAGCCCAGCCCAGACAGCTGC
ATCTTCAGCATGGTTGTGGGTCAGCTCAAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MGDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLK
MG.KPI.EQIGSSFIQHYY.L.DN.RTQLGAI...AS.LTWEGQQ.QGKAA..EKLSSLP.Q.IQHSI..Q.H.P.PDSCI.SMVVGQLK
Retrocopy
MGEKPISEQIGSSFIQHYYHLLDNGRTQLGAILLAASYLTWEGQQLQGKAAVAEKLSSLPLQEIQHSILVQNHEPSPDSCIFSMVVGQLK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide