RetrogeneDB ID:
retro_opri_1174
Organism:
Pika ( Ochotona_princeps )
Location:
scaffold_8752:46309-47155 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
90.46 %
Coverage:
74.87 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
GABPA
Parental gene aliases:
No gene alias available
Parental gene description:
GA binding protein transcription factor, alpha subunit 60kDa [Source:HGNC Symbol;Acc:4071]
Genomic region (view in browser)
>retro_opri_1174
CTGGATCCAGAGCGAAGTATATTTGACCAAGGAGTAAAGACAGATGGAACTGTACAGCTT
AGTGTACAGGTAATTTCTTACCGAGGAATTGAGCCGAAGCTGAACATCCTTGAAATTGTT
AAAACTGCAGAAACTGTTGAAGTGGTCATTGATCCCGACGCCCACCATGCTGAAGCTGAG
GCACATCTTCTTGAGGAAGCTCAGGTGATAACCCTGGACGGCACCAAGCATATCACCACC
ATTTCAGATGAAACCTCAGAGCAGGTGACGAGATGGGCTGCCGCGCTGGAAGGTTACAGG
AAGGAACAAGAACGCCTCGGGATACCCTATGATCCTATACAGTGGTCCACAGACCAAGTC
CTACATTGGGTGGTTTGGGTCATGAAGGAATTCAGCATGACTGACATAGATCTCACCACA
CTCAACATTTCCAGAAGAGAATTATGTAGTCTCAGCCAAGAAGATTTTTTTCAACGAGTC
CCTCGGGGAGAGATTCTTTGGAGTCATCTGGAGCTTCTTCGAAAATATGTGTTGGCAAGC
CAAGAGCAACAGATGAATGAGATAGTCACCATCGATCAACCTGTGCAAATTATTCCCGCT
TCAGTGCAGTCAGCCACACCCACTGCCATTAAAGTCCTGAACAGCAGTGCCAAAGCAGCC
AAAGTCCAGAGGGCTCCACGGATTTCAGAAGACAGGAGATCACCTGGGAACAGAACAGGA
AAAAATGGACAGATCCAGCTATGGCAGTTTTTACTAGAACTCCTTACTGACAAAGATGCT
CGAGACTGTATTTCATGGGTTGGTGATGAAGGTGAATTTAAACTAAATCAACCTGAGCTG
GCAGCT
Parental protein coverage
Changes in the retrocopy sequence
