RetrogeneDB ID:
retro_opri_1191
Organism:
Location:
scaffold_91202:4442-4682 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
66.25 %
Coverage:
98.77 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
ATP6V0E1
Parental gene aliases:
No gene alias available
Parental gene description:
ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 [Source:HGNC Symbol;Acc:863]

Genomic region (view in browser)





>retro_opri_1191
ATGACGGCGCACTCCTTCGCCCTTCCCGTCATCATCTTCACCACGTTCTGGGGCGTCATC
GGCATCCCCGGGCCCTGGTTCGTGCCGAAGGGGCCTAACCAAGGAGTGAGCATCACCATG
CTGGTGGCCACCTCCGTCTGCTGTTACCTCTTGTGGCTCATCACCATTCTGGCTCAGCTG
AACCCCCTCTTTGGGCCCCAGCTGAAGAACAAGACCATCTGGTACCTGCGCTTCCTGTGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAYHGLTVPLIVMSVFWGFVGLLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYHW
M..H....P.I....FWG..G...PWF.PKGPN.GV.ITMLV..SVCCYL.WLI.ILAQLNPLFGPQLKN.TIWYL...W
Retrocopy
MTAHSFALPVIIFTTFWGVIGIPGPWFVPKGPNQGVSITMLVATSVCCYLLWLITILAQLNPLFGPQLKNKTIWYLRFLW


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide