RetrogeneDB ID:
retro_opri_131
Organism:
Location:
GeneScaffold_2640:147190-147481 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
93.81 %
Coverage:
65.54 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL27A
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L27a [Source:HGNC Symbol;Acc:10329]

Genomic region (view in browser)





>retro_opri_131
ATGCCATCCAGACTGAAGAAGATGCGGAAACTGCGCGGCCACGTGAGCCATGGCCATGGT
CGCATCGGCAAGCACCGGAAGCACCCGGGAGGCCGTGGGAACGCTGGTGGAATGCATCAC
CACAGAATCAACTTCGACAAATATCACCCAGGTTACTTTGGGAAAGTTGGTATGAGACAT
TACCACTTAAAGCGGAACCAGAGCTTCTGCCCAACTGTCAACCTGGATAAGCTGTGGACG
CTGGTCAGTGAGCAGATCCGGGTGAATGCTGCCAAGAACAAGAGCAGCTCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGA
MPSRL.K.RKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQ.RVNAAKNK...
Retrocopy
MPSRLKKMRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQIRVNAAKNKSSS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide