RetrogeneDB ID:
retro_opri_14
Organism:
Location:
scaffold_3350:13325-13649 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
91.59 %
Coverage:
75.54 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_opri_14
GCCAATAACCTCTACATCATCTCCGTGAAGGGGATCAAGGGACAGCTGAACAGGCTCCCT
GCCGCCGGCGTTGGGGACATGGTGACGGCCACAGTCAAGAAGGGCAAGCCAGAGCTGCGG
GAGAAGGTACATCCAGCAGTGGTAATTCGACAACGAAAGTCATATAGAAGAAAAGATGGT
GTGTTTCTTTATTTTAAAGATAATGCAGGAGTCATAGTAAACAATAAAGGCGAGATGAAA
AGTTCTGCCATCACTGGACCAGTTGCAAAGGAGTGTGCAGACTTGTGGCCCAGGATTGCA
TCCAACGCAGGCAGCATTGCCTAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFL-FEDNAGVIVNNKGEMKGSAIAGPVAKECADLWPRI-
A.NLYIISVKGIKG.LNRLPAAGVGDMV.ATVKKGKPELR.KVHPAVVIRQRKSYRRKDGVFL.F.DNAGVIVNNKGEMK.SAI.GPVAKECADLWPRI.
Retrocopy
ANNLYIISVKGIKGQLNRLPAAGVGDMVTATVKKGKPELREKVHPAVVIRQRKSYRRKDGVFLYFKDNAGVIVNNKGEMKSSAITGPVAKECADLWPRIA


Parental protein
SNAGSIA
SNAGSIA
Retrocopy
SNAGSIA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide