RetrogeneDB ID:
retro_opri_18
Organism:
Location:
GeneScaffold_5315:56184-56565 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
88.1 %
Coverage:
56.76 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_opri_18
GTCCTGCCCGTGGCTGGCTCCCTGCAGAAGAGCACAGAAGTGATGAGGGCCATGCAGAGC
CTCGTCGAGATCCAGGAAATCCTGGCCACCATGAGGGAGCTGTCCAAAGAGATGATGAAG
GCTGGGATCGTAAAGGAAATGTTGGAGGACACCTTTGAGAGCATGGACGACCAGGAAGAA
ATGGAGGAGGCAGCAGAAATGGAAATCCACACAATTCTGTTTGAAATCACAGCAGGGGCC
TTGGGCAAAGCACCCAGTAAGGTGACCAACGCCCTTCTGGAGCCAGAACCGCCAGGAGCG
ATGGCTGCGTCCAAAGACGAGGAGGAAGAGGAGGAGGCCCTGGAGGCCATGCAGTCGCGC
CTGGCCACACTCCAAAGCTAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VLRVAGSLQKSTEVMRAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPNKVTDALPEPELLGA
VL.VAGSLQKSTEVMRAMQSLV.I.EI.ATMRELSKEMMKAGI..EMLEDTFESMDDQEEMEEAAEMEI..ILFEITAGALGKAP.KVT.AL.EPE..GA
Retrocopy
VLPVAGSLQKSTEVMRAMQSLVEIQEILATMRELSKEMMKAGIVKEMLEDTFESMDDQEEMEEAAEMEIHTILFEITAGALGKAPSKVTNALLEPEPPGA


Parental protein
MAASEDEEEEEEALEAMQSRLATLRS
MAAS.DEEEEEEALEAMQSRLATL.S
Retrocopy
MAASKDEEEEEEALEAMQSRLATLQS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide